searching ... STRING: functional protein association networks

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organism

protein

Calothrix sp. PCC6303

AFZ03766.1 - PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG4597 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: ana:alr4165 permease protein of amino acid ABC transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Permease protein of amino acid ABC transporter; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; L-aspartate ABC transpor [...] [a.k.a. Cal6303_4868, K9V7F5_9CYAN, calt:Cal6303_4868]

Sediminispirochaeta smaragdinae

ADK79931.1 - Polar amino acid ABC transporter, inner membrane subunit; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: aco:Amico_0415 polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transpor [...] [a.k.a. Spirs_0796, ADK79931, E1RC51]

Marinithermus hydrothermalis

AEB12206.1 - Polar amino acid ABC transporter, inner membrane subunit; COGs: COG4597 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: opr:Ocepr_1292 amino acid ABC transporter membrane protein 1, paat family; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; IMG reference gene:2504661074; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transpor [...] [a.k.a. Marky_1471, WP_013704253.1, F2NPC5]

Intrasporangium calvum

ADU47473.1 - Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR000515: IPR003439: IPR013563: IPR017871: IPR 010066: IPR003593; KEGG: sma:SAV_5609 ABC transporter permease protein; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transpor [...] [a.k.a. Intca_0948, ADU47473, NC_014830.1]

Oscillatoria nigroviridis

AFZ09220.1 - PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: ava:Ava_0738 amino acid ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; L-aspartate ABC transpor [...] [a.k.a. Osc7112_4954, AFZ09220, oni:Osc7112_4954]

Treponema saccharophilum

EIC02592.1 - PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR017871:IPR003439:IPR013563:IPR003593:IPR010066; KEGG: dhd:Dhaf_3017 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Peptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transpor [...] [a.k.a. TresaDRAFT_1872, EIC02592, H7EIE1]

Lactobacillus hokkaidonensis

potB - ABC-ATPase subunit interface; ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]; COG1176; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and..; cd06261; conserved gate region; dimer interface [polypeptide binding]; gene_1867; identified by MetaGeneAnnotator; putative; putative PBP binding loops; spermidine/putrescine ABC transpor [...] [a.k.a. BAP86447.1, LOOC260_119410, Spermidine/putrescine ABC transporter permease]

Lactobacillus oryzae

potB - ABC-ATPase subunit interface; ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]; COG1176; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and..; cd06261; conserved gate region; dimer interface [polypeptide binding]; gene_1211; identified by MetaGeneAnnotator; putative; putative PBP binding loops; spermidine/putrescine ABC transpor [...] [a.k.a. LOSG293_190200, GAK48113.1, A0A081BJ95_9LACO]

Desulfurobacterium thermolithotrophum

ADY72988.1 - Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR010066: IPR003439: IPR013563: IPR003593; KEGG: aar:Acear_0632 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; PFAM: ABC transpor [...] [a.k.a. Dester_0332, ADY72988, 3.6.3.24]

10)

Syntrophobotulus glycolicus

Sgly_2554 - Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003593: IPR003439: IPR013563: IPR010066; KEGG: cob:COB47_1722 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; PFAM: ABC transpor [...] [a.k.a. ADY56836.1, WP_013625701.1, sgy:Sgly_2554]

11)

Lactobacillus oryzae

GAK47668.1 - Putative glutamine transport system ATP-binding protein; ABC transporter signature motif; ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; COG1126; ATP binding site [chemical binding]; D-loop; H-loop/switch region; HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP..; cd03262; Q-loop/lid; Walker A/P-loop; Walker B; amino acid ABC transpor [...] [a.k.a. LOSG293_100330, WP_034527226.1, A0A081BI00]

12)

Streptomyces pratensis

Sfla_0758 - PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sgr:SGR_1081 putative glycine betaine ABC transporer permease protein. [a.k.a. ADW02220.1, WP_014152895.1, ADW02220]

13)

Streptomyces sp. SirexAAE

AEN13606.1 - PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sgr:SGR_1081 putative glycine betaine ABC transporer permease protein. [a.k.a. SACTE_5820, AEN13606, G2NRH3_STREK]

14)

Sphaerochaeta coccoides

AEC02412.1 - Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR013563:IPR010066:IPR003593; KEGG: sta:STHERM_c02800 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide transporter; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; IMG reference gene:2503957508; PFAM: ABC transpor [...] [a.k.a. Spico_1199, scc:Spico_1199, F4GLL8]

15)

Rhodopirellula baltica

nrtB - Nitrate transport permease protein; PMID: 8437564 best DB hits: BLAST: ddbj:BAA21794.1; (AB000100) intrinsic membrane protein; E=6e-30 swissprot:P38044; NRTB_SYNP7 NITRATE TRANSPORT PERMEASE PROTEIN; E=4e-29 gb:AAB86903.1; (L27431) nitrate transporter component; NasE; E=1e-27 COG: sll1451; COG0600 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=9e-28 BB0145; COG1174 ABC-type proline/glycine betaine transport systems,; E=1e-05 PFAM: PF00528; Binding-protein-dependent transpor; E=8.5e-12. [a.k.a. RB372, CAD71541.1, Q7UYV0_RHOBA]

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